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Thermodynamic investigation of a new water-soluble porphyrin with calf thymus DNA
Hamid Dezhampanah (1,*)
, Abdol-Khalegh Bordbar (2) , Shahram Tangestaninejad (3) (1) Department of Chemistry, Faculty of Science, University of Guilan, Rasht, IR-0098, Iran
(2) Laboratory of Biophysical Chemistry, Department of Chemistry, University of Isfahan, Isfahan, IR-81746-73441, Iran
(3) Laboratory of Biophysical Chemistry, Department of Chemistry, University of Isfahan, Isfahan, IR-81746-73441, Iran
(*) Corresponding Author
Received: 07 Jun 2010 | Accepted: 21 Sep 2010 | Published: 22 Dec 2010 | Issue Date: December 2010
Abstract
The equilibrium binding of a new water-soluble tetra-cationic porphyrin, 5-(1-(4-carboxybutyl)pyridinium-4-yl)10,15,20-tris(1-methylpyridinium-4-yl)porphyrin (5-CBPyP) with calf thymus DNA in comparison with meso-tetrakis(4-N-methylpyridinium)porphyrin (TMPyP) has been studied in 7.5 mM phosphate buffer, pH=7.2; and at various temperatures by UV-Vis absorption, fluorescence spectroscopies and viscosity measurement. The thermodynamic parameters were calculated by van't Hoff equation at various temperatures. The values of -137.13±1.22 kJ/mol and -337.21±4.75 J/mol.K for 5-CBPyP and -159.12±1.22 kJ/mol and -406.11±4.45 J/mol.K for TMPyP, were estimated for enthalpy and entropy changes of interaction, respectively. The data indicate that the process is exothermic and enthalpy driven suggesting that electrostatic forces play a considerable role in the interaction process. The results of spectroscopic techniques and viscosity measurement represent the intercalation mode of binding for both porphyrins and higher binding affinity of TMPyP respect to 5-CBPyP.
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DOI: 10.5155/eurjchem.1.4.307-311.155
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The G-triplex DNA could function as a new variety of DNA peroxidase
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[3]. Tadeusz Strozik, Marian Wolszczak, Maria Hilczer
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DOI Link: https://doi.org/10.5155/eurjchem.1.4.307-311.155
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